PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN21864.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 92aa    MW: 10609.1 Da    PI: 7.3667
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN21864.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.4e-0516591555
                HHHHHHHHHHCTSCCC......TTS-STCHHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkas...kapskKlsKaeiLekAveYIksLq 55
                +iN+ + +L+ llP++    + ++  +s + i ++++ +I  Lq
  KHN21864.1 16 EINDLMLRLQALLPQLNqtsNSRASSVSVMKIMKETCSHITRLQ 59
                7**************76465555555777789999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-61574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-61674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MPGQRNSRTS KFTESEINDL MLRLQALLPQ LNQTSNSRAS SVSVMKIMKE TCSHITRLQK  60
EVKDLGERLV QLMDSVDLSD IDEERFTRLL QQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003522332.16e-61PREDICTED: transcription factor PRE4-like
TrEMBLA0A0B2QNX17e-61A0A0B2QNX1_GLYSO; Transcription factor bHLH135
TrEMBLI1JWW87e-61I1JWW8_SOYBN; Uncharacterized protein
STRINGGLYMA04G33920.12e-60(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47710.15e-10BANQUO 3
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]